YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39995253, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIAATWFGT GLSPVAPGTV GTLGAIPLYL ALARLPLWLY LATLVPFFFL SSWVAGRAQE  60
   61 EFGQKDPGKV VIDEVIGYLI TMAGVTADWR SILAGFLLFR FFDVVKIWPA RYFDRRMKNG 120
  121 YGVVLDDVAA GLYACAALHL LLGYL

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.69
Transmembrane Helix	7	30	0.82
Cytoplasmic	31	36	0.63
Transmembrane Helix	37	56	0.92
Non-Cytoplasmic	57	77	0.75
Transmembrane Helix	78	102	0.71
Cytoplasmic	103	120	0.79
Transmembrane Helix	121	142	0.87
Non-Cytoplasmic	143	145	0.75