YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39995137, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHLALAALA LVAQFNVPRY TEAPVYYVDV VNLPVASPRA GSPTVGGAPP ELPPPASQAM  60
   61 ATPRLTPHTP AAVGKKSPTA ADTGKEFEDR LSALQRNVDE RRQEAALDAL RRKVNGSGRA 120
  121 EPAGMPSATG TQAGSDYAAY IQSRLRDAFR YTIAHQAKTP EVVIRLTIDP RGRVTRQRIE 180
  181 RSTGDRIFEE SVMKAIAMAE KTFAPPPSGG EFETGFIFRP EGVGKR

Type	Start	End	Confidence
Signal Peptide	1	21	0.87
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	226	0.99