YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85092010
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVIPLILRF IQLIFLIILT GLIGNVIALD VDASTTARAA INFTMFVIAL SWVVALFGLV  60
   61 AAIFQSVAIP LVMLIFDAAA TLFTVVAGIV LAAKLGTPNC GNLANDHYGH KWIAYGSADD 120
  121 AKRCREIQAG TVFMWLLLAA FSAALTLAIM SWRRTGGSVR SGPTMSQVVV

Type	Start	End	Confidence
Cytoplasmic	1	7	0.51
Transmembrane Helix	8	29	0.92
Non-Cytoplasmic	30	39	0.45
Transmembrane Helix	40	64	0.86
Cytoplasmic	65	70	0.42
Transmembrane Helix	71	93	0.87
Non-Cytoplasmic	94	130	0.50
Transmembrane Helix	131	152	0.90
Cytoplasmic	153	170	0.50