YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37200139, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLWHPLLSI FHYLTWVVCL QSIIKLSHTA NGKPKRSVVV MLSHYFRRLL EDKHMLKIAD  60
   61 KQFHSRLFTG TGKFANSQLM SQAIEQSGSQ LATMALKRVD IHNQQDDILS PLLSAGVNLL 120
  121 PNTSGAKNAK DAIFAAHLAR EALGTNWLKL EIHPDPKYLM PDPIETLAAA EQLVKDGFVV 180
  181 LPYCHADPVL CKRLEEVGCA AVMPLGAPIG SNKGLVSQDF LQIIIDQAKV PVVVDAGIGA 240
  241 PSHAAYAMEL GADAVLVNTA IAAARDPIAM ARAFKLAVEA GRLAYESGLA GKVSHAVASS 300
  301 PLTSFLDECL S

Type	Start	End	Confidence
Signal Peptide	1	21	0.57
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	311	0.91