YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37199984, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKHPIIAV TGSSGAGTTT TSEAFRKMFN MMNIKPAWVE GDSFHRFTRP EMDVEIRKAK  60
   61 EQGRHISYFG PQANDFPALG EFFRQYGKSG TGEVRRYLHT FDEAVPYNQM PGTFTPWQKL 120
  121 PENTDVLFYE GLHGGVVDGE VNVAQHVDFL IGMVPIVNLE WIQKYVRDTR DRGHSREAVM 180
  181 DSIVRSMDDY LNYITPQFSR THINFQRVPT VDTSNPLNAK GIPSLDESFV VIRLRGIKNV 240
  241 DFPYLLAMID GSFMSRHNTL VVPGGKMSFA MELIVQPILQ QLIETGKIG

Type	Start	End	Confidence
Signal Peptide	1	24	0.85
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	289	0.99