YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37199972, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLMKSVLK VSLLAATVML AVGCQKEEAK PAAAPQAEQV QAETGKAVHF KSEDDKAAYA  60
   61 IGVSFANYLS ASLDKPSEIG INLNKDLVLK GIEHVFAGNP ELNEEETRAA LEALDKRVAE 120
  121 TMQKKAAEKA EAAKKAGDEF RAEFEKQEGV VKTDTGLLYQ VITPAEGEKP KDTDTVQVHY 180
  181 KGTLTDGTQF DSSYDRGEPA TFPLNRVIPG WTEGVQLMPV GSKFKFVIPP ELAYGAQDTP 240
  241 SIPANSTLVF EVELLKIENG DNAQ

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	264	0.99