YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37199962, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFQTRKFAS LLLSKVLRIF AESKSALHWE VNVANVYVWR KRLSTRLLRH YSSKPVNLNG  60
   61 FLFDTFSIGS TVIEAKEEGY VMKGDPIIIQ HLNKVLGNEL IAINQYFLHA RMYKDWGLKH 120
  121 LADKEYHESI DEMKHADHLV ERILFLEGIP NLQDLGKLMI GEDTQEMLEC DLKLEMAAIP 180
  181 DLKAAIAYAE DVHDYVSRDL FQDILEDEEE HVDWLETQLG LIQLTGIENY LQAQFVDED

Type	Start	End	Confidence
Signal Peptide	1	21	0.80
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	239	0.99