YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37199900, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISLFVLAL LKKLSFLKGI SMLDSVASTL QLSELLSLTK AEQSIRLAEI NVELEMLSAQ  60
   61 ERVAWALQNL EGAHAVSSSF GIQAAVMLHL LSKQQADIPV ILTDTGYLFP ETYQFIDELT 120
  121 KSLNLNLKVY RANESANWQE ARYGKLWEQG IEGIEKYNKL NKVEPMRRAL NELNVKTWFS 180
  181 GLRREQSQSR AGLPILSIQN GVFKFLPVVD WSNKDVHYYL KEHGLSYHPL WEQGYLSVGD 240
  241 THTTQKWEPG MSEEETRFFG LKRECGLHEE DNEQDGSGI

Type	Start	End	Confidence
Signal Peptide	1	17	0.53
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	279	0.96