YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37681121, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKSRGFTLV EMVLTLIVGS ILVLGIAGFV ELGTKGYVDS VDRQRIQIQA QFVLEKLSRE  60
   61 FRHAVPNSFD YNEDGCLVFY PIVYSGFYAV EGNDIRFLIG NDKVTTPLSS GLGLVINPSR 120
  121 KDDLKNSSFN VSNLDNSAGY FELTGQASQL KSESINHRHY IFWNRTEDDA VRYCFNRDSI 180
  181 TRNDVQVADN VSAATFQYLE PTLQRGGLVH IKLTFTQNDE SSHYQQDVQV LNVP

Type	Start	End	Confidence
Cytoplasmic	1	8	0.66
Transmembrane Helix	9	30	0.71
Non-Cytoplasmic	31	234	0.91