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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37680899, gi|...
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDMAKNLIL WLVIAVVLMS VFQSFGPGES NGRAVDYTTF VQEVGQGQIQ EATFKDGEIT  60
   61 FVRRGGGGKF VTYMPVYDQK LLDDLINQNV KVQGTPPEEQ SLLGTIFISW FPMILLIGVW 120
  121 IFFMRQMQGG GGKGAMSFGK SKARMMSEEQ IKTTFGDVAG CDEAKEDVKE LVDYLRDPSR 180
  181 FQKLGGKIPT GVLMVGPPGT GKTLLAKAIA GEAKVPFFTI SGSDFVEMFV GVGASRVRDM 240
  241 FEQAKKASPC IIFIDEIDAV GRQRGAGVGG GHDEREQTLN QMLVEMDGFE GNEGIIVIAA 300
  301 TNRPDVLDPA LLRPGRFDRQ VVVGLPDVRG REQILKVHMR KVPLAGDVEP SLIARGTPGF 360
  361 SGADLANLVN EAALFAARGN KRNVSMVEFE LAKDKIMMGA ERRSMVMSEE IKESTAYHEA 420
  421 GHAIVGRLVP EHDPVYKVSI IPRGRALGVT MYLPEQDRVS MSRQHLESMI SSLYGGRLAE 480
  481 ELIYGVDRVS TGASNDIERA TDIARKMVTQ WGFSEKLGPM LYAEEEGEVF LGRSVTQTKH 540
  541 MSDDTAKLID DEVRKLIDRN YERARQILID NMDIMHAMKD ALMKYETIDA GQIDDLMARK 600
  601 ETIREPAGWG DQAATEKTEK SEAKAEEKTA EPEVTAQSQP DEVQQPTDKK DAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle