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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37680407, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.80
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIKLAPLAR LWIALIFLFS VTTYAQTQAN TLEPAQSANA ARKPQIDVGV LATRGHLYAH  60
   61 QRWQPTIYWL NQQIPQVHFV LHPLDLDGMT QAVEQQSMDF ILTNPGQAVR LGRQYALSWV 120
  121 ATLTSEAPEN SNYGIGSALV VRANSPYQTL DDVAGLPMAA VAEKAFGGYL TLRYQVIEQG 180
  181 LNPNDFFADV RYLGFPIDAS LYQLRDQTIE AAVVPACLKE QMENEGLIEQ GQLRVLNPLN 240
  241 EPQTQCEVST PLYPNWSFAK TERGSSQLAK QISRALLAMP ADNPAAIAAK ASGWTSPVSL 300
  301 LSIDKLYQAM DLHPLQQPWW KDALRWLRAH QEWAWALFLF VIVLNIYHFW LEYRFSKSKQ 360
  361 ALEQTQQRLK EKSELLEHSQ RVAIVGELGS SLAHELNQPL AAIRNYSEGV LLRLAKNRPN 420
  421 QEIVPVLEKI QRQVERADAI VSRLRNLIKK RSVAISKFDL PQLISDTLEL MQFRLQKQMV 480
  481 EVVCSSEGQQ HPIEADMVGL QQVLVNVINN AIDACVSYAK LHPEQYSSKI AIHTDFATQG 540
  541 VTIRILDNGT GLKQENPTEA FVSSKQEGLG LGLSICRDVL EMHGGEFTIQ SSNPHGCLVE 600
  601 LCLPYQAVPS LSKNAMSTPN AATDSTNSTK GTRNEW

YRC Informatics Platform - Version 3.0
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