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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SYM_VIBVY
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANDPRNFPQ RKLLVTCALP YANGSIHLGH MLEHIQADIW VRYQRLRGNI VNFICADDAH  60
   61 GTPIMLKAQQ MGMSPEEMIA AVSIEHQKDF AGFDISFDNY HSTHSDENRE LASHIYLQLK 120
  121 KNGFISSRTI SQLFDPEKEM FLPDRFVKGT CPKCKSEDQY GDNCDACGET YSPTELINPK 180
  181 SAVSGATPVM KDSEHFFFDL PQFESMLKEW TRSGSLQTET ANKMQEWFES GLQQWDISRD 240
  241 APYFGFEIPG EKDKFFYVWL DAPIGYMGSF KNLCDKRDDL DFDEYWNKDS KTELYHFIGK 300
  301 DIVYFHSLFW PAMLDGSGFR KPNNVFVHGY VTVNGAKMSK SKGTFVKAST YLEHLDPECL 360
  361 RYYYAAKLNS RIDDLDLNLE DFTQRVNADV VNKIVNLASR NAGFIAKRFE GKLAENFVEP 420
  421 ELYNEFVAAA DRIAELYEAR EFGRAIREIT ALADKANQYV DEKAPWVVAK QEGKDQELQE 480
  481 ICSVGINLFR VLMTYLKPVM PALAARTEAF LNEELTWEGV AQPLTAHEIT AFKALFNRID 540
  541 PKNIEAMIEA SKEDAAAEMA AKEKAEASNA AQETELSKDP IAEEIEFDDF AKVDLRIAKI 600
  601 VSCESVPKAD KLLKFQLDIG GEMRQVFSGI KAAYNPEDLV GKYTVVVANL KPRKMKFGMS 660
  661 EGMILAAGPG GKDLWILEPH EGAQPGMRVM 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle