YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37198180, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMFMPIKPKC WAWSAKRKSR CVWIATLTLT RKKRRGNMSC SRRNFLAGGG ALIMTTGIAG  60
   61 TSMVTGRLAF AEEDKGQAIR YGMIHDETAC IGCTACTDAC REVNKVPEGV SRLEIIRSEP 120
  121 HGEYPNVDYR FTRKSCQHCE NPPCVYVCPT GAAYKDEKTG IVDVHKEKCV GCGYCLAACP 180
  181 YQVRFFNPVD HSADKCNFCR DTNLAQGKLP ACVESCPTKA LIFGDLNDPQ SDVNRVLAEK 240
  241 VYYRDKVHLG TKPKLFKIPH QKGEV

Type	Start	End	Confidence
Signal Peptide	1	59	0.62
N-region	1	50
H-region	51	56
C-region	57	59
Cleavage Site	59	60
Non-Cytoplasmic	60	265	0.97