YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37198130, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFWQRSHGCK YKTWSLCMYK NKITQALLLG AGLTLATTSL SALAADVPAG TKLAAKQELV  60
   61 RGNGTEVATI DPHKSQGVPE SHVIRDLLEG LVNQDADGNT IPGVATSWET TDNKTFTFHL 120
  121 RKDAKWSNGD PVTAQDFVYS WQRAVDPATA SPYSWYMEYT KMKNAKDIVA GKKDKSELGV 180
  181 KAADDYTLVI ELETAVPYFV MMTGHTTMKP VHKATVEKFG DQWTKPENFV GNGAFVVDKW 240
  241 VVNERLEMVR NTKYWDDSKT VINKVTFLPI ENAVAEMNRF LSGEIDFTST LPTEHFKRLK 300
  301 KEHPESVSVE GSLCTYYYSF NTKKKPFDDV RVRKAISYAI DRDIVANAIL GQGQKPAYFL 360
  361 TPEITANFNP ELPEYGKMSQ KERNAEAARL LEEAGYGKGN PLKFTLLYNT NENHKKIAVA 420
  421 LGSMWKKTLG LDVNLENQEW KTYLSTKDQG DFEVARAGWC GDYNEASSFL TLMVSANTTG 480
  481 GQHWGNAEYD ALIDKALKST SEAERTALYL DAENLMAKDM PIAPIYQYVR SRLLNPRVGG 540
  541 FPSNNAEEKI YSKDLYIIAK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle