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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37679126, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNALVSNSR FGWIDFLSFR VSKMLKQTLI AASVIASLAG CSTLQSDEQR VVNSLADNLD  60
   61 IQYQVMTNHG ANEGLACGDM GAEWASCNRV NMTLVNQGDA VSAKDWAIYF HSIRLILDVE 120
  121 NDQFKISRVT GDLHKLEPTD KFDGFAAGEE VVLPLIGEYW TLFETDFMPG AFVTAPNAEP 180
  181 KMIASLNTED VASFVAGLEG NNLKRTPDDN NVFASAVSRF EKNEDLAKQD VSTTLLPTPL 240
  241 FVEAGKGTVD IAAGIALPKD AFDAAQFAAI QERAEVVGVN VRGDVPVSIT VVPADFTGEL 300
  301 AKSGAYEMSI QGDGIAIKAF DQAGAFYAVQ SIFGLIDSQN ADSLPQLSIK DAPRFDYRGV 360
  361 MVDVARNFHS KDAILATLDQ MAAYKMNKLH LHLTDDEGWR LEIPGLPELT EVGANRCFDI 420
  421 EEKSCLLPQL GSGSTSDNFG SGYFSKADYV EILKYAKARN IEVIPEIDMP AHARAAVVSM 480
  481 EARYDRLMAE GKEAQANEFR LMDPQDTSNV TTVQFYDKQS FINPCMESST RFVDKVISEV 540
  541 AAMHSEAGAP LTTWHFGGDE AKNIKLGAGF QDVNAQDKVS WKGTIDLSKQ DKPFAQSPQC 600
  601 QTLITDGTVS DFGHLPSHFA EQVSKIVAEK GISNFQAWQD GLKYSEGENA FATENTRVNF 660
  661 WDVLYWGGTS SVYEWSKKGY DVIVSNPDYV YMDMPYEVDP KERGYYWATR ATDTRKMFGF 720
  721 APENMPQNAE TSLDRDGNGF TGKGEIEAKP FYGLSAQLWS ETVRNDEQYE YMVFPRVLAA 780
  781 AERAWHRADW ENDYKVGVEY SQNSNLVDKA ALNLDYNRFA NVLGQRELAK LEKSGIDYRL 840
  841 PVPGAKVEGG KLAMNVQFPG VTLQYSLDGK NWLTYADDAR PTVEGEVFIR SVSATGEKAS 900
  901 RVTSVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle