YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37197841, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRLTYLAV QNRAFVMPSK CSMKWKRSAL TFSNPMTSFA TQSSRASSMP TRSGKHKTKK  60
   61 SVKSLNNVAE KSAMPNCLKP QKPSFLHKSA RIRKPHMAIE LDLQLAVEDQ NGLPSAQDFQ 120
  121 TWLDKTIPPF QPQAEVTIRI VDSQESHQLN HDYRGKDKPT NVLSFPFEAP PGMEMDLLGD 180
  181 LVICRQVVEQ EAIEQDKPLM AHWAHMVVHG SLHLLGYDHI EDDEAEEMES LETEIMQGMG 240
  241 FTDPYLAEKE

Type	Start	End	Confidence
Signal Peptide	1	46	0.52
N-region	1	37
H-region	38	43
C-region	44	46
Cleavage Site	46	47
Non-Cytoplasmic	47	250	0.99