YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37197254, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINLPFQQAI LPRFLMRSAA VASLILLSGC VQRFDDMSTT LNEAFFGAED ITQTSQQVLA  60
   61 LPYASTYMRI NDGQRIFMVL GYAEQNPENN QLQLKWVSSD GGMIVTENGR VVKTLNLPYG 120
  121 NLIRREVDLA HSQQAKPWQT NLQWQSQYDW KTQGSNSNKG MHYGYLGNVT LTQMGSEEAI 180
  181 SAIWQQTLTI WQENIFFPQL DTTVQNQYWV NDSGQVMKSI QYLGPEMTRI EFEILKPFAE 240
  241 VAQ

Type	Start	End	Confidence
Signal Peptide	1	33	0.93
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	243	0.99