YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37678261, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTAHPFLLS ERFSSMSNKF DVVVIGAGAA GLMCAAEAGR RGRKVLVLDH AKKPGRKILI  60
   61 SGGGRCNFTN NEVSAKNYLC RNPHFVKSAL SQYSNWDFIS MIYKYGIEFE ERDHGQLFCL 120
  121 DSAKEIVNML LSECDQPNIA QRYQVLLTEI EKTEQGFVLR AGAEAFECQS LVVATGGLSM 180
  181 PKLGATPFGY KIAEQFGIPV VPTTAGLVPF TLHKQDKEDF AELSGIAIPA EITAEDGTLF 240
  241 KEALLFTHRG LSGPAVLQIS SYWKAGQAVS INLVPEVDVL ELLQRNLEKH PNQSMKNTLA 300
  301 KVLPKRLVEV LIERNELTDK PLKQYNGKEL QEIVEYLEHW KIAPNGTEGY RTAEVTLGGV 360
  361 DTDYLSSKTM ECKTVPGLYF IGEVMDVTGW LGGYNFQWCW SSGFVAGQWV

Type	Start	End	Confidence
Signal Peptide	1	38	0.64
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	410	0.95