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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85085443
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEDDMLRLN SRANFRFRSL YRVSVRGVVG FPAAGSTTVC KREMNGVGWD AWRDTYLDAV  60
   61 ASEFHCMAST STAGDRIKKF LGIPADERLN DTACYVDGSF VESEPTTQDF LNEIRPTVQG 120
  121 TLNYLRELFP FVNWIFHYNL TWLLGDFIAG VTVGFVVVPL GFCYVKGYND RSTIVGNIIA 180
  181 NVQKDHPDFD AGDIARTLAF ISGAMLLFLG LIRFGFIVEF IPIVAISAFM TGSAISIAAG 240
  241 QVSTLMGIPN INSREETYKV IINTLKGLPN THLDAAMGLT ALFGLYFIRW FCTQMGKRYP 300
  301 RQQRAWFFVS TLRMVFIIIL YILVSWLVNR HVKDPKKAHF KILGHVPSGF QHKGAPRLDN 360
  361 EILSAISGDI PTTILVLLIE HIAISKSFGR VNNYIINPSQ ELVAIGFTNL LGPFLGGYPA 420
  421 TGSFSRTAIK AKAGVRTPLA GIFTAVLVLL ALYALTSVFF YIPNSALAAM IIHAVGDLIT 480
  481 PPREVYKFWL TSPLEVVIFF AGVFVSIFTS IENGIYVTVA ASGAVLLWRI AKSPGKFLGQ 540
  541 TEIYTAPREL VRGSKDSGLT QSLLQKSEHH TAFLSLDRDD LSNPELQIST PWPGIFVYRF 600
  601 GEGLNYVNSA KHLDNLTIHV FKHTRRTELN KFEKLGDRPW NDPGPRRGQA FLTDELVSRP 660
  661 TLRAIILDFS AVNCIDVTAA QALQDLRNQF DRYAHPDKVE WHFAGVSNRW TKRALVASGF 720
  721 GVDSLRTAKV QRENHKGGVQ EVDQGPLVAI GPSVSASDIE AVPVGTSGSG STDEKRPEGE 780
  781 GGATNGGMEK GSANGEDIST VPTATSADAC ALARDAGGKR LVPVFGINRP FFHIDVATAL 840
  841 KSAVRNTGVV AAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle