YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37677250, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNQSTETRT MMTRKTLISA LVGAAMTFGA TASAYAATTL KLSHNHPRDH AVHKAMDYMA  60
   61 KEVRELTGGE VRIRIYPDAQ LGTQRESMEL MQNGALDMVK SNAAELEAFS PAYSAFNLPY 120
  121 LFRDKEHYYK VTDGEVGREI LNSSAQSGFI GVTYYDAGAR SFYTSKPINT PADLKGLKVR 180
  181 VQPSPSAIAM VKALGGNPTP LAYGELYTAL QQGVVDAAEN NIPSFSLSRH SEVSKFFSLD 240
  241 EHTMVPDVLV ISTKTYDKLT PEQQQALMKA AADSSEYMKK LWAESEAKER AKAEKMGVTF 300
  301 VEPNKAAFVE AVQPMYQEIE KSNPQLNQLI ERIKAVQ

Type	Start	End	Confidence
Signal Peptide	1	36	0.81
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	337	0.99