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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37677141, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMKPLSLYI ALALTSGAVL AEPIPSKPAT QATIEANQAV YQALNFKDET DFKNAQRGLI  60
   61 AKQDVVTIKN ANGDVVWDLE AYKQFISLEN KAPDSVNPSL WRNAQLNMIN GLFEVTEGIY 120
  121 QVRAYDLSNI TFIKGDKGWI VFDPLISQET AKAALEFVNA QLGERQVTAV VYSHSHIDHF 180
  181 GGVRGIVNEE DVKAGKVEII ASHGFTEHAV SENVIAGNAM GRRAIYMYGA LLPRNERGGV 240
  241 NGGLGQTTST GLPTLIVPTR IIEKTGEELT VDGVRMVFQY TPGTEAPTEI NTWFPDKKAL 300
  301 WMAENSTNTM HNILTLRGAQ VRDALKWSSY LNETIEMWGD EVEVKFQSHH WPMWGSKEIV 360
  361 AYFKGQRDMY KYTHDQTVRL MNQGYIGSEI SEVIQFPEEL EKNWSTRGYY GTLRHNSRAV 420
  421 YQRYMGWYSG NPSDLNNLPP TNAAVKYVEY MGGESATIDK AQADFDKGNY RWVAEVLKHV 480
  481 VFANPQSKRG KALLADTYEQ LGYQAESGPW RSVYLQGAYE LRNGTPKAGG TNTASPDIIK 540
  541 NMPPEMLFDY LAVRILPEKA AGKTFAININ FTDLDEQYTL YVENSVLNHT RKQAKKADVT 600
  601 LNLTKATLDD VQLGNITLEK AIADGDVQLK GNRQVFKDFV GMLDKFDFWF NIVTP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle