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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37676977, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLQIATVA LLIGAALGFT ANQYFNGHDM SAMAATDNKA SHEPLYWVAP MDPNYKRDKP  60
   61 GKSPMGMDLI PVYADDLAGA NDKPGTVKID PSVENNLGVK TAAVELAKLS PRIETVGYIA 120
  121 FDESKLWQTN VRVSGWVEKL YINAVGEQVK KGDVLFTLYS PELVKAQEEL LNAKRTGRDG 180
  181 LVKGATERLL SLGVDREQIN QVIRRGKASQ TIEIKALANG VIASLNIREG GYLSPAQAVI 240
  241 SAGPLHEVWV DAEVFERQAH WLTNGSQASM TLDALPGKAW QGEVDYVYPI LDPKTRTLRM 300
  301 RLKFANPNGE LKPNMFANIT LQPVSDSEVL TVPKSSVIRS GGMTRVVLAE GEGKYRSARI 360
  361 ETGREADDKV EVLLGLNQGD RIVTSAHFML DSESSQSADL SRINGVEAAA ETAWAKGEIT 420
  421 DLMADHGMLT INHQPVPEWN WPGMTMNFNA AQGVDLSALQ KGQAIEFEME KTPEGQYQII 480
  481 AVKADNSVIV NEVWLSGDVS MLMADFGMVT LSHLPVAEWN WDSGEMNFSV GDEINLSGFE 540
  541 EGQKVRFLVA KEGSDYQLKQ LEAMGGQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle