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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37201014, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRVPSLHRV ICNENLYFNY KTLEVASCVR YKKMINKANS QGIAMQIGVP RELLAGETRV  60
   61 AASPSSVEQL IKLGFDVVVE TQAGALASFD DSAYESAGAK MVSKEEAWNS ELILKVNAPI 120
  121 IDEEKSIDEI ALIKEGATLV SFIWPAQNPQ LMEQLSSKNI NVLAMDAVPR ISRAQALDAL 180
  181 SSMANIAGYR AVVEAAHEFG RFFTGQITAA GKVPPAKVFV AGAGVAGLAA IGAAGSLGAI 240
  241 VRAFDVRPEV KEQVESMGAE FLSVDYQEAA GSGDGYAKEM SDDFNKKAAE LYAAQAKDVD 300
  301 IIITTALIPG KPAPKLITKE MVDSMKAGSV IVDLAAANGG NCEYTIANQV ITTANGVKVI 360
  361 GYTDMVGRLP TQSSQLYATN LVNLFKLLCK EKDGNINIDF EDVVLRGVTV VKDGEITWPA 420
  421 PPIQVSAQPQ AKPKAVEKPA PKVQEPVSPV KKLAGLAVGV GAFAWIASVA PAAFLTHFTV 480
  481 FVLACVVGYY VVWNVTHALH TPLMSVTNAI SGIIVVGALL QIGQGNGAVT FLAFIAVLIA 540
  541 SINIFGGFTV TKRMLEMFRK DK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle