YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37676415, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIVMSSWLK ASALIVVAGL TACTSSPTGR NQLLMFSDSE MSTLGTNSFE QMKKEIPISQ  60
   61 NKATNQYVQC VAKAITDTIP PQPGFKEWEV VVFDSDQVNA FALPGGKIGV YTGLLNVAVN 120
  121 QDQLATVIGH EVAHVLAEHS NERLSQSQLA NAGLQLANVA IGASEYKQYQ QITMAALGVG 180
  181 VQYGVILPYG RTQESEADIV GLEYMAKAGF DPKQSVELWK NMAKASGGNQ PPELLSTHPS 240
  241 HSTRIKDLQD KASKLPVYQG KSPSCKA

Type	Start	End	Confidence
Signal Peptide	1	25	0.93
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	267	0.99