YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37676029, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKKTVIGAI ALMSALTVTT ASAKETISAV GSSSVTPLME VFSETYMKKN PEVFIEVQGP  60
   61 GSSAGVKAAK NGSADLGMSS RDLKSSEKET ALVEEVIARD GIAVVVNPKN TLKGLTAEQV 120
  121 SAIYKGEVTN WKQVGGEDKP IVAITRDTAS GTRGAFEDIL KLKKKISGKE VSAISQRAQV 180
  181 ANGNGALKTM VASNPYAIGY ISLGTVDESV HPLAIDGTDA SIPNVKNGSY KVARPFLVLY 240
  241 KQGKPSAETQ KFLDWMLTPE AQAIVEKKGY ISVN

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	274	0.99