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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37200445, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRQSTTHL LISLNSVVLN KETSMRKINL GPLQPIAAFV AIALGLVTLS RFLLALWQFD  60
   61 RIAAADGWSN LLFQGLRVDI ATLCWLFILP CLLAAILPVE GMVGKIWRAV LRVWLVAGLW 120
  121 IMVYMELATP PFIMEYDLRP NRLFVEYLIY PKEVFSMLWQ GYKIELFIGL VGSIATLWLG 180
  181 WIFSGKVTEN VRQIKWQWRP VLAIAVVLLG VLGARSSLGH RPLNPAMVAF SSDPLVNDLV 240
  241 LNSSYSVFFA INNMKSERSA DKFYGQMSQD KIIELVKASS AKHDFVQGSL PTLNVNNATY 300
  301 QGKPKNLVIL LQESLGARFV GGLGGLPLTP NLDKLLEEGW NFTQMYATGT RSVRGIEAIT 360
  361 TGFPPSPSRA VVKLSKSQTG FFTIADLLKK QGYHTQFIYG GEAHFDNMKS FFLGNGFEQI 420
  421 VDEPQYQNPE FTGSWGVSDE DLYNKADEEF TRLNKEGKPF FSLVFTSSNH SPFEYPAGKI 480
  481 EPYESEFNTR NNTVKYSDYA LGTFFDKAKQ SDYWENTIFI VIADHDARVF GSQLVPVDRF 540
  541 HIPAVILGKG IEPRKDDRLA NNIDMPPTLL SLIGIDATSP MIGRDLTKPL AREDERAMMQ 600
  601 FDKNYGYLTR DSLVVFSPGE KVSSYHYNFE DKSLTPKEVS QEALDKAKAN ALFGSMAYKY 660
  661 NWYKSDY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle