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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85085211
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLQLRHSVL TPLRIESNVN PENREEICSG PLDNEMEQGA GVIEPLAEGE WQSGEDTATS  60
   61 DYDPSIAESR YGSLTSSVND HVWEYGRRYH TFREGRYPIP NDDLEYNREY MRHAMLKEIL 120
  121 EGKLFIAPIG TRPQKIADLG TGFGDWAIEM GETYPSAKVV GVDLSPIQPV WIPPNVEFVV 180
  181 DDIEDEWVQD SDFDFIHLRW VSITLKDNET LFRRIFENLK PGGWVESVEV KPRVFSDDDT 240
  241 VKPDHALLRF YDLTREVLST RYGFQVEIAH RISELMQRIG FINVREIVMK VPVGEWPRDQ 300
  301 HQRIIGRLMK EVSMDLCVAM SARPFIENGM EEKEREELQS SVKAVLNDRR VHAQLPVYFI 360
  361 YVSTTRPLLL LRSTLKPDSL DHLDLSQGPN PSCRVRGWGQ TEGKTGEGAP QDSRGIIQEC 420
  421 AYFANAESAF SSSSPSPPQN AGPPKPPSNV DSSRGLRLYG LEGCQEPLVE LLCRQASRIL 480
  481 QLYGTSSGDA GSSDHASLQP GAEREKAIAL VKRRLELLTK TAYGKFYAYM YKEVPACWRQ 540
  541 LYTDAAILRF AVLVLLEFNF QADAGSKEDA DEKEKERRMK RKMIVDEMVK TLDLSLILAG 600
  601 AAGQSRGRKW VDEAFALLDD VLGDMSAVTT AAAAGGAKKG NDDEQEGERP QKKRRLSSSP 660
  661 NTKDEVIKGI NDTWHNTPSF STIEPFTPPV KNPISRVSAE SLSIEAFQSH FAKPRPDGNP 720
  721 GPAPLIITGL VDHWPALTTH PWNKPAYLLS RTLSGRRLVP VEIGRSYVDE GWGQKIISFG 780
  781 EFLSKYIDAS IPYTPSSSNV SPFLSSSSSA QPQPSSSDLL PEKDNTQIAY LAQHPLFLQL 840
  841 PRLRQDILIP DLCYTAPPPH PTDPSQDQPE LDSPQLNAWF GPPGTITPLH TDPYHNLLVQ 900
  901 VVGRNTMAIS RPTRLERAEA PHNNGCIRHF GHLSFVARHH AFATYLSPRT CPRILRTTET 960
  961 VANTIAYPTM TGHHTNYHNS TTCLSQAESL SLLALSAACV AVLANTFQGD GYPLIASLAL1020
 1021 GGLAFSATFS MIRWLGPTFM RAGLKGVDMS KHHKKELPEC MGAIAAMVYL LAVIVFIPFP1080
 1081 FYKDIVAATS GGGNRDVVMH VEHVQEGRFL HRFPHGKLAS YLSAVMALQS ISLLGIGDDL1140
 1141 FDIRWRHKFF IPAFASIPLL VVYFVDFGVT SVVIPTPLQP YLGELFNLGA LYYVYMASVA1200
 1201 IFSPNSINIL AGINGIEVTQ SIVIALLLAF NDCLYLLTPY PHPATDSHLF SLYFLVPFLG1260
 1261 VSFALLWHNW YPARVFVGDT YCYFAGMVFV VVSILGHFSK TLILLLIPQI FNFVYSVPQL1320
 1321 FGLVPCPRHR LPRFNARTGL LEPSVTPWTP ERQPKPPVAW ALKTLDKVKL LRVTLDEEGR1380
 1381 FVETSNFTIL NLWLVWRGPL REDRLAMEIT GMQVVVGLFG LFVRHRLALI LFKQDNLGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle