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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28922496, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.75
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATTTTTNA GRSMASWKRL STLIAAFTLS WTSSFVAAAG SADYFVHDLP GAPDGPLVKM  60
   61 HAGHIEVTPD NNGNLFFWHF QNKHIANKQR TVIWLNGGPG CSSEDGALME IGPYRLKDEN 120
  121 TLVYNDGAWN EFANVLFVDN PVGTGFSYVD TNAYIHELTE MAANFVTFLE RWFALFPEYE 180
  181 HDDLYIAGES YAGQHIPYIA QAILERNKNA GPVNRKWNLS GLLIGNGWVS PKEQYDAYLQ 240
  241 FAYEKDIVKK GTDLANKLEI QQRICQKEIA VKPDKIDYPE CEAILQDMLQ LTAGGVGASG 300
  301 KNQCYNMYDV RLKDDYPSCG MAWPPDLKSV TPYLRKKEVI KALNINDNKS TGWTECNGQV 360
  361 GMNFNPKTKP SITLLPDILS AGVPILLFSG AEDLICNHLG TEALISNMEW NGGKGFELTP 420
  421 GTWAPRRDWT FEGEPAGFWQ QARNLTYVLF YNSSHMVPFD YPRRTRDMLD RFMGVDISSI 480
  481 GGQPTDSRLD GEKLPETTVG GAAGNSTSNQ AAEKAKLEMA KWEAYRKSGE LVLVIVIVAA 540
  541 GVWGWFVWKE RRKTAGQGYM GVATGERHSI SNNPGPRGNL SGGGDRTRGQ GLAGFRNKRS 600
  601 GRRDVEAQDF DESELDDLHL SKPEDPHADS RYSIGGASDD EEEQKPGKGS SSRQPGGRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle