YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|35214987, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTHLASIQ DLRSYDPQLI GAYYRRRPLV ILRRALAVSF AFLIFGLQLW GDKLSGSIER  60
   61 NRRKRASQLR QLLTDLGPGS IKVGQALSTR PDLLPKDYME EMTRLQDQLP PFDNAVAFEY 120
  121 IKSELGRPAQ EVFARIDPTP VAAASLGQVY RAQLHTGEKV AVKVQRPDLV GKLTLDLTLL 180
  181 RWFCARFAGR LPLNLGHDLA SIVDEFGNKL FEEIDYENEA TNAERFARYF ESDPTVYVPR 240
  241 IYRDYSSRKV LTLEWIDGIK LTDVAAVKAA GLDIESLVRI GVEAGLKQLL EYGFFHADPH 300
  301 PGNLFAMRDG RMAYIDFGMM DQLSEETKEN LVDSLVHLIN REYKALAHDY VKLGFLAPGT 360
  361 DVAPIVPALE LVLGDIIGQK VQDFNFKTIT DRFSDLVYEY PFRVPAKFAL IIRSLITQEG 420
  421 IALSLTPDFK IIQVAYPYVA RRLLTGESPR LRQRLLDILF KDGRFQWHRL ENLIQIAGTG 480
  481 GSFDLLPAAQ YGLESLFSKD GSFIRERLVL ALTEGDRLHT HELGRLWNLV RPAIQPRKLV 540
  541 DQALDRLRER LTPPAAQPVL RS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle