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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37523707, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRLCFTDPP AANGEHREIG RHLSSGLRAM ATMQTIPWFW CVLLVLWAAA PALAAEVQQT  60
   61 ILPNGLRVLT KEIRTSPAVT VQVWYGVGSR DEAPGGTGLA HQLEHLMFKG TKARPVQFGR 120
  121 LFNALGADAN AFTSFDQTAY YATAGSDKLE ALLQLEADRM RGAVIDAPSL AGEKTVVLSE 180
  181 LDGRQNNPRS VLNEMVLAKA FNRHPYRITP IGERKDVEAF TVDQVRDFYR RHYGPNNATL 240
  241 IVVGDFETAR LLEKVRRHFG PIEPIAGFKP LVPPVEPPQS AEQRVELRRP GRVPALQVLY 300
  301 RTPAANDPDV PAIDVLDTIL TNGRSGRLFK ALVETGLATG AGGSQSTQRD PGWYSFSITP 360
  361 RQDPETVLKA LDATLAEVRS QGVTAAELAR AREQVRVSLL LGKDSIEAQA NLLGSFQTTF 420
  421 GDYRKLDTYL QQIDRVTSKD IQRVLQKYFE PTNRTVGVFI PTDGAAAAPQ GTPETTQVTS 480
  481 YASGQPVDFD AVSRYLPALG KSGPVREPRP VEATLPNGIR VQVLRNPSAP TVSVLGRFQA 540
  541 GSAFENPERA GIAGMVSALL DEGTRTRSAD ELAMLLEDQG IRLGFQARRE NTLMQAAALA 600
  601 EDLDLLMALG ADVVRNPVFP EKEFERVRAQ YLTSLANTLD SPAGVAQRTF YSLLYPPAHP 660
  661 FHTQITEASL KAITRADLLD FHRRFYRPQD FILTVVGDVD PQRVIEQVRT HFGDWKVEGP 720
  721 APELKAAPVT PALRREAVVL PGKREAQVIL GGVGIARTDP DYYAVLVMND ILGGNTLSSR 780
  781 LGARVRDQLG LTYGVYSRYA PGELAGPFTI QMQTNPANVE RAVAAVNEEL ASFRKDGPTG 840
  841 AELERARRSL IDRFPLALTD NAGVANLLLE EAIYGLGRDY PTRFVRSLEA LKVEDIRRVA 900
  901 NRLLQPEAFT TVVVSPNPAP VAKPAARGP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle