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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|35213695, gi|...
Protein type: Transmembrane
Type Confidence: 0.65
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRALNESTVE PRFESAALTR PGAGLPSAAA PDLPFKSYDP DLIARYAERR FGRVLWRFFQ  60
   61 TLLPFVGFAL QVQWDRLTGT VARHQLKRAV RLREILTRLG PTYIKIGQAL STRPDLVPPV 120
  121 YLDELTLLQD RLPPVPNAEA YALIRAGLGR DPHEIYAEFD EVPIAAASLG QVYRARLTTG 180
  181 ERVAVKVQRP NLIPLVSLDL YLQRGLLGWV ERNVPQVKSD LQAILDEFGR KLFEEMDYVQ 240
  241 EGKNAERFAA CFTEMPEVYV PRIYWDYTCR QVLTMEWIDG LKLTRLEDIQ RAGLNARKVI 300
  301 ENGVQCSLRQ LLEHGFFHAD PHPGNLLVMA DGRLAYLDFG MMSEVEPAQR YGLIEAIVHM 360
  361 VNRDFDGLAR DYVKLGFLKP DQDLKPIVPV LAVVFGQALG SSVGSLNIKS ITDNMSSMMY 420
  421 DLPFRVPAFF ALIIRSLVTL EGIAISVDPD FKVLEVAYPY VARRLLTDNA PELRASLSEL 480
  481 LFKDGSFRWN RLENLVRNAR SARDYDINRA LDQAAEFLLS ERGASIREKL IDELTSASTV 540
  541 NPNVPGGKAS GLQNLERLWS LLREDPKLDL RKSVSILGKL ILKPEGRDLS RRVAGRLLER 600
  601 ELARLLRRTL LPATLA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle