YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37522050, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPSYRHCFM SSPPNPQPEE NKLWSFLKSQ RENIQSIAVA LVLTFTIQTF AAQAFYIPSG  60
   61 SMEPTLLIND RLMVEKITYD FSTPERGQII VFTPPKNHFN SNDQPFIKRV IGLPGDTVEV 120
  121 KAGKVFINGK ALDEKYIAEP PAYVMPPVKV PADQFFVMGD NRNNSFDSHI WGFLPRQNVI 180
  181 GRAIFRFWPL DRLGPLG

Type	Start	End	Confidence
Cytoplasmic	1	33	0.77
Transmembrane Helix	34	57	0.72
Non-Cytoplasmic	58	197	0.96