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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|35212793, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRPHIVCEI ELHLSNLFAC RWVHVFNLAL ALGLCLSTAW PLIAPASAAA PIAGDLAEAE  60
   61 RLHQRSLQLW QQGDYAQALE PAEQAMAVRE RLLGPENPDV AASLNHLGNL LADRGDYGRS 120
  121 ELLYERALAI RQKVFGSKHP SVAASLNNLA ALQAKQGRYR EAEPLYERAL AIREQVFGPE 180
  181 HPEVAKTLIN LAALFRKQGR YREAEPLYER ILAIHQKVLG PEHPEVAKTL NNLALLYVDQ 240
  241 GRYREAEPLY ERALAIHQKV LGPDHPQVAK TLNNLAILQT KQGRYREAEP LYERALAIHQ 300
  301 KVLGPDHPDV AVKLNNLAFL YVDQGRYREA EPLYERALAI HQKVLGPDHP QVAANLNNLA 360
  361 LLHVAQGKYL EAEPLLKHAL VIHHKTLGPE HPDEAQVLHS LAVLYTSLGR YREAEPLLEQ 420
  421 ALAIHQKAFR LQHPIIVSIL QTFASLRLKQ ARPAEALGLL QERLDVQERL LGLNLAVGDE 480
  481 ARKRDYLDTL VEGVDLSVSA HLRYAPTEPA AARLALGAVL QRKSRVLDEL TGGLAQLRAR 540
  541 LAPGQQGLLD QLAQTRSTLA TLVFRGLQQD TPEQYKARLD ALERQTRQLE TDLAASGAEL 600
  601 GTLSRPVTVD AVQQQLHAGT VLVELVRYRP LNPAATRKAD RFAPEHYAAF LLSSDGPVWA 660
  661 VELAEAAVID RMVLDLRALL ANADTPVVAV RALARQLDSL LMQPLRARLG DVHTLWIAPD 720
  721 AQLNLLPFGA LVDEQGRYLL ERFELVYLSS GRDLIRLSDL PVPPRQGPLL VAAPDFDNAG 780
  781 PPAVNAAHRS APSLRSADLA ELRVEGLPGS AKEAAALLAL LPGARSLTGA AATENALKEA 840
  841 HGPLLLHVAT HGFFLEPISR VGENPLLRSG LALAGFNKRA SGGEDGVLTA LEAMGLDLEG 900
  901 TELVVLSACD TGLGEVAGGE GIYGLRRALS IAGARSQMFS LWQVGDTATA QLMVAYYRQL 960
  961 LAGWGRSEAL RRVQLDLLQG GERAHPYWWA AFVATGDRRP LALNGDYPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle