YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12718224, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKLPTTLL RRPSALPSTT TYTAYSASRP TPPSCTAHGA QGQQIRNATF VPRHRRPYQF  60
   61 TQLVQLSDGS TFTVRTTMPT ALYKSAKDSR NHLLWQPSDK SLKNVELDEA GKLAAFRERY 120
  121 GRGWDLDAKM TPEEEAAAAA ALAAGGGAGV PGGKAAKKAA EEALLAKKKK EEEEAAKKAA 180
  181 EAEEADPFDS LTDLISGYAT ENMNPGLNFK ETRHYGKKK

Type	Start	End	Confidence
Signal Peptide	1	26	0.79
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	219	0.98