YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34558438
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYERFTPIS YHVTIQKSYL KRESVMNWLK NTFGSFWLTL PLLFLYALAC AVATFIENDY  60
   61 GTASAKALIY STRWFDALHL LLTLNLIATL FLSQAWQRKK WASLLFHSSL IVIVIGAGIT 120
  121 RYFGFEGTLH IREGQTQNRM TSQEPYLIVR ALEGDQKYYA EFPLPMAPLG KKDFDYKVLI 180
  181 NGEPLHLIYL DYQPSQNPKS SEATLEIKAH YKGETQTLAL EGGNDLRGIT VPADIGGAKF 240
  241 LMEWGIKEIP LPFSLKLERF ELERYPGSMS PSSYASEVIV IDEGKNIEMP YRIYMNHTLD 300
  301 YGGYRFFQSS YDRDEKGTIL SVNNDPGKLP TYIGYAMLTL GLLWNFFARN GRFYRLGRFV 360
  361 RSQNIGAFLV AILLALALHP SSLSADENTL RMLSNLQAHS KAHAKEFGNL LVQDFGGRIK 420
  421 PIDTLASDYV HKITKKEKLL GLEPTQIFLG MLMYPNEWKQ VKMIKITTPR LKEVLGVPLE 480
  481 DGYIAFEDVF EGNRYKLSNY VEEANRKKPA MRDKFDKDVQ SVDERLNVAY LIYTAQALRL 540
  541 FPDMEGMTDK WHSPIEAIQT FSERDASFIQ GILQEYFIAF DKGVEDNEWG DATKALGNFV 600
  601 ALQTRYGSNL ILPPSRIKAE IWLNHSQIFA RLSYAYILLG LALFGVVFIG IIRAKSASSW 660
  661 LSKGLFYLIL FTVLLHTLGL GLRWYVAGHA PWSNAYESMI YIAWAAAISG ALFFRRSSLA 720
  721 LSTASILAGI SLFVAHLGFM DPQITNLVPV LKSYWLNIHV SVITASYGFL GLSFMLGFIA 780
  781 LLMFALRHPQ KPQLDASILS ITAINEMSMV IGLAMLTVGN FLGGVWANES WGRYWGWDPK 840
  841 ETWSLISIVL YTLILHVRFI KGGDKPYVLA SLSVLGFYSI LMTYFGVNFY LSGLHSYAAG 900
  901 DPLPIPSFLY YLVALTFALI LLGGRKGDLE APKLP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle