YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34483977
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADENKETAQ AEGKKNKLII FIIAGVIALL LIIGGVVVYF MLSSNPEPQA ASAQASQSTS  60
   61 GGAKAGGASR SGGGNFLSVG PMYALDQFIV NLTTQSGRRY LKTSINVELS QPNLTAELDT 120
  121 KRAVIRDTVI SILSSKSIEE ISTMKGKEKL KEELIERLNE FLVDGRIVNL FFTDFVVQ

Type	Start	End	Confidence
Cytoplasmic	1	17	0.98
Transmembrane Helix	18	42	0.92
Non-Cytoplasmic	43	178	0.90