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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34557246
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLFALVTL LLLGLTLHAS TQKLSLRLQW KHQFEFAGFY TAIEKGYYQE AGLEVELKEY  60
   61 ENGVNIIQEV LEGKSHFGIW GSGIIKEQME GKPILLLANY FKRSPLAIVT SPEIKSPGDL 120
  121 KGKRLMLSEV NIDSANFTHM LQGFGLSMKD IQILSTSFNI HDFIDGKVDA YSIFLTNELF 180
  181 DLQRLGVRYN ILDPSNYGVE LYDENLFGAK EFVLKNPTLV KRFIDASNRG WQYALDHPEE 240
  241 IVDLILERYN TQNKTKEQLL FEARETAKMV LSRSYPIGSI DPHKVRKIGE IFAEARLAPP 300
  301 AKDYASFLFG QIRTSLDLTE AERAYILMRP TLRVQNESDF APMNYHSDGG QPAGFSIDYI 360
  361 KLLASKVGLK VEYVSGPTWS EFLQMMRDGR LDAMVNIAKS PEREEYLLFT SPYSEIISAV 420
  421 FTKDSRAQEF SSLNDLKGKK LAVVKGFFEE ALLKKHYPEI EMVFAEDTLS ALKMVAFGKA 480
  481 DAAINSLQVG NFLIKKSGLS GMAPAFEVQD PQFRVNLHVA TSSSNSTLRN LLEKAKEQVS 540
  541 DSELLLLTSK WFLQGNAPDK EKRITLSEKE RAYLKARSTP FTLCVDPLWM PFEKLDSKGN 600
  601 YEGIAADLLK IVFERTGVEA KVLQTKDWVE TLNAVKSGQC DILSFSNQTP AREEWLLFSD 660
  661 PLFQDPNVFI THADHPFITN PKSLEGKTIV LPKGTSIEEW VRRDYPWLKL ILVETEEEVF 720
  721 KALLERKADL SIRSLTVAAY TIKKEGLFSL KIAGQLPEKD NHFRMGIKPK EPILRDILNQ 780
  781 GIHTLTPEEI DRIANKFVSV NIQKGFDYSL LWKILIGMAG IFVGFFYWNR KLTEYNKALQ 840
  841 AAKEKAEAAT QEKSNFLANM SHEIRTPMNA IIGMTYLAQQ TDLTPLQRDY LQKIEGSANA 900
  901 LLGLINDILD FSKIEAGKLE IECIDFDLHS VIEHVSTLVE LKATEKNLEF VVSYDQGMNM 960
  961 NLHGDPLRLG QILTNLANNA IKFTHEGEVG IYITKQELHR YRFEVRDTGI GLSPGQKEKL1020
 1021 FRSFSQADTS TTRQYGGTGL GLAISKQLVE MMNGRIWVES EEGKGSSFIF EIELNEQENA1080
 1081 PKESKAFSHK HVLIVDDTPS WQKILARLLK GFHIEVSVAS SGEEALRLIK EQPGFYDLIL1140
 1141 MDWKMPQMDG IETTKLIKES CETPPPTIIM VSSYRQENIV NAAKEQGINV FLQKPINPSL1200
 1201 LYNVLLEILG EGIKQSGVQK ADSHSLKNEL TTRAGSQILL VEDNAMNREI IMGMLQPFGI1260
 1261 RIDIAQNGQE AVTLYQENPK RYELILMDIQ MPVMDGYEAT KILRAQGANL PIIALTANAM1320
 1321 KSDIERTKAA GMDEHLNKPI VVEKLFGTLL AHLTPKCAPQ ENPSLAPQEL QSSTLPTLVH1380
 1381 TDTLKGIAHL AGDEALYRKL LRDFIEHYEN LEIEPASQEG ARILHTLKGL SANLGMDELS1440
 1441 RLAKECEENP SLTSLASLTQ ALSQALQELK ESGILSDSTP LIPQIAAPEG RVEEIWSELG1500
 1501 SLLPKRRPPL CKPLLEELEG YALNERDRAL FERLKPLVER YKFSEALKIL EERLS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle