YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34482241
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKTLLSSLA LVTLLVLAGC DDKEGIKSEV ISQKRDTEAT KFSLELTDGH KLKVDRHEKG  60
   61 LHFEGEKGKV VLLNFFATWC PPCKAEIPHL VNLKSNYKDQ FEVVGVLMED SKTKGEIQKF 120
  121 IDTFDINFKI AISNENQKLA KALGGVKSIP FMILYDPQGN YFTHYVGAVP EEMIEFDIKR 180
  181 AMEKQ

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	185	0.99