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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16945432, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPPRDSSPE RDYRPRRQSA QRRSRNSSAV RNSDDNGERG ERAGREPRRR SRRPEPGTSV  60
   61 PPITRGEPRG ESSNGSSATL SAAALAQLNK QNAKRKASPK KEVKRALERS YDAQSERDVA 120
  121 WEREQERERE RMREARRESR MRREKERERE QQEKERERER ERVRERERER ERDRERERQR 180
  181 GRAKPPRVAT VESEDEYRYA PSRKPRDSRD AARDDRTRPK PRIMPPDSDD EYQYLTAKKR 240
  241 EERARKRAPA MESDDEYQRL TPHRRTDSDD KGYRVVDARP DKPKSYERLR PDNRAGEDRS 300
  301 RLRVASGPML EQGIRARNVS GGMLEKGGFM ARFQNLRGGH GGPSMSSSSG YESVDKMSDD 360
  361 IGSSPPKRKR KKLWIAVGIG VVIVIIIIII AVTVSKKKSD DGDGKGSNDT PSQGLGDISP 420
  421 DDIPADAPAW LNPFKWADTT DFNLTYTAQT VGDLPVMGLF SQWDDSKAAN DQVPALNKPW 480
  481 GDYSKRPARG VNVGGWLSLE PFITPSLFAY DLRLGIVDEY TLCTHLGSRC ESVFEKHYAT 540
  541 FVTEQTFKEI ADAGLDHVRI PFSYWAVQTY DGDPYVFRTS WRYLLRAIEW CRKYGLRVNL 600
  601 DLHGLPGSQN GWNHSGRQGY IGWLNGTDGD LNAKRSLEIH DRLSKFFAQD RYKNIISHYG 660
  661 LANEPKMTFL SVDAVLQWIE DAYALVRKNG VKDAIVVFGD GFRGLANWQG ELQDLGDGAA 720
  721 LDVHQYVIFN TNQIVYKHHD KIKYACEGWT EQTELSMDRS RGYGPTLVAE WSQADTDCAK 780
  781 YLTNVGWGNR WTGTLLTGSE SSDVSTPRCP YTDSRCDCIA ANAPPDQWSD DYKTFLKMFA 840
  841 EAQMYSFEKG WGWFYWLWDT EDAYQWSYKK GLAAGVLPEK AYQRDFNCDV SKIPSFDNLS 900
  901 EAF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle