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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28922753, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFADLLVDL AAVANASRSV AGKHVALRAS QIDRYTKTSS IASLAKDLGR SKQQHQQQQQ  60
   61 HYQQQKPESQ QQEQRQQDVA QSQSQQPVQG ARVEEVIQVK EEVPVEQPSA SVAAQPKIPP 120
  121 STLVSEARVS AATPESQKST SKPFTPAPWA DRKPLPQPSP FPKPPRIGVK SIIPGIPADL 180
  181 AALKGGANSE EAGVDLSSIF MTNKGSKILE ELSKEPTVPA VEITPEPVPA VVPELKTTEV 240
  241 EVKAEEEVQV TQPLVEQESV QTVVEEARQP KPEEKPIPVA EAPASTPAPP PAAVKPTPQE 300
  301 TKATKLSQED ADLVAELTGS PLPASTRHEL RESKVPASRI SRLWNYGGLA AGMMAGAIGE 360
  361 GFSRAIGGGS SGSVMLSPGN VERLVSRLSR MRGAALKLGQ MMSIQDSKML PPTIQEVFQR 420
  421 VQDRADYMPA WQRDRVLVSN LGADWRSLFD EFEEKPIAAA SIGQVHRATL KSNGARVAVK 480
  481 IQFPGVADSI NSDLDNLAIL LAATKLLPKG LYLNKTIDNA RTELAWECDY LREAECGARY 540
  541 RELLAADGQE DAVFAVPHIY AEASGKQVLT MEWMDGVGVT RVKDFSQEQK DWIGTQILRL 600
  601 CLREITEFKF MQTDPNWTNF LYNPEKQRLE LLDFGASREY PEEFISLYIR LLEAASRGDR 660
  661 PAVKSLSEEL GYLTGHESRA MLEAHITSVV TLAEPFLQSA PEVYDFRDQT ITERVKAQIP 720
  721 VMIHERLAPP PEETYSLHRK LSGAFLLCAR LGSRVRCREM FEKALEKTEY FGKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle