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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85103299
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRTSVSLPT KHVAHDPHEK PDRYRRDQHN QEPASVFIRM QNAWMSQSQK ARYLKTGAIV  60
   61 FAVLFLFYLF SPSGVEISGA DGGPSQGNQG QVPSDSSYGT DRCTRSFSKE KPIVQYVSMI 120
  121 DAGSTGSRIH VYKFNNCGPA PELEGEVLFK MTAKIEGQSS GLSAYKDDPL AAAKSLDPLM 180
  181 QAALEVIPDK LKACSPVAVK ATAGLRLIGP EKSQKILDAV REHLENDYPF PVVSKEEHGV 240
  241 AMMDGADEGV YAWITVNYLL GKIGGPDHSP TAAVFDLGGG STQIVFEPTF EGLASGGMPQ 300
  301 KLADGDHKYE LNFGGRKFDL YQHSHLGYGL MSARDAIFAT LVNDLFELNK QDKSWMQKPV 360
  361 INPCFSTGMT KTVKVPLGDS HPLGPKVELN MTGPSTPAPA LCRSLAERIL KKDAECKLAP 420
  421 CSFNGVHQPQ IAKTFAREDI FLLSYFTDRT QPLGMPESFT LREMHDLAAQ VCGGEQSWDV 480
  481 FTSVPGALEE LSDRPEHCMD LNFMLALTHT GYEMPIDREV RIAKKIKDNE LGWCLGASLP 540
  541 LLSQSSGWKC KIKEIH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle