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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85103222
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFQLGPVS ARVRVSTLSS TAFGRCPTST RFTRLEIPFS ASTRAPPAHQ MFGRRFFSNH  60
   61 MPKRPRMQWH PIPIGLGIGL LGVMQFYKVY TRDRDEKRQA AVEGSEPGQA GKPKKRRRIR 120
  121 PDGPWQVQVM STLPLKAMSR LWGKFNELTI PYYLRAPGFR LYAYFFGVNL DEVEEQDLHK 180
  181 FPNLAAFFYR TLKPGVRPVD PNHNALVSPS DGRILQFGRI EGGDIEQVKG MTYTIDALLG 240
  241 QNSPTPSISG TTLLDESTKA KSVNGDFEGD EELVKKDEEF ARVNGISYTL PDLLSGSKKH 300
  301 DKLFKPKDES VTPSKTSETE VSAELALGEK PWYDVLSGGE RHTLYYAVIY LAPGDYHRFH 360
  361 SPTEWVVERR RHFAGELFSV SPYLQRTLPG LFTLNERVVL LGRWRWGFFG YVPVGATNVG 420
  421 SIKINFDREL RTNSLTTDTA ADRAAELAAA KGEPYLGYAE ATYEAASPVL KGHALRRGEE 480
  481 MGGFQLGSTI VLVFEAPVAE HDESGKVTKG WTWDVEKGRK IKMGQTLGHV AL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle