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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85099224
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPPPRQPR QLNLVLTLFL LCFNVLFGQA AAAQEDEAIL NSEIARLNNQ SLLWGPYRPN  60
   61 LYFGVRPRMP KALMTGLMWG KVETYTDYQT SLRYTCEQNE GMKGYGWDEY DTRRGGVQSI 120
  121 HDTENGIDIT TSFVKVPGGA TGGSWAARVK GRLQEGVPSD RKTAVILYVT QEGLGTLEAA 180
  181 KGDDENGYEG DVTLNGNSAA LGDYKLVLTK GKGKHPKSDH KVTEVRGDAH TVVQSLTYQE 240
  241 EFLWQAKGIV FKQLKESVDA FVDKYFDKED PPPAWQVFQL ENRPGAGNVH IIQRVFEGDF 300
  301 EFDILFSSAS AGKELSSADL TREIQEATES FGERFSSVFA IKAPFTAEKY EKFGRSMFSN 360
  361 LIGGIGYFFG ESVVDRSYAP EYEEDHEGFW EEAAAARARN KPTLEGPYEL FTSVPSRPFF 420
  421 PRGFLWDEGF HLIPIADWDI DLAMEIVKSW YNLMDEDGWI AREQILGAEA RSKVPEEFQT 480
  481 QYPHYANPPT LFFIVDTFVN RLRNANGTMP AVKEHLSQGV SLSSASIDNV EVGLEYLRRL 540
  541 YPLLRRQFYW FKKTQYGDIK SYDRDAYSSR EAYRWRGRTL THCLTSGLDD YPRPQPPHPG 600
  601 ELHVDLMSWV GLMAKSLANA AEVIAPEEVE DYTKVLDGIE HNLDDLHWSE KDGCYCDATI 660
  661 DEFEEHQLVC HKGYISLSPF LTGLLKPDSP KLGKILALIG DEEELWSPYG IRSLSKKDEN 720
  721 YGTAENYWRS PIWININYLI ITQLHNLATQ EGPYQETARD MYQRLRKNVV ETIYNSWEET 780
  781 GFAWEQYNPE TGKGQRTQHF TGWTSLVVKI LAMEDLPEAA PVAPVESQYV KDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle