YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85102566
Protein type:	Transmembrane
Type Confidence:	0.57
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGIANVVTV LGDRITNNVK GTFANMTAEK WIRLIIIVGA YALLRPYIIK LGGKAQMKKH  60
   61 EEESAEALRG TISPNELRGQ KAMVRLPGED SDSEDDEAQN GESSAADWGK KARKRQRMVI 120
  121 KKLIEAEEDK LRESKEEEED KDIEEFLLKD

Type	Start	End	Confidence
Non-Cytoplasmic	1	30	0.91
Transmembrane Helix	31	49	0.56
Cytoplasmic	50	150	0.50