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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85075871
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.82
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILSRIALL SLTTAAAHAA TVVYDFNVSW ITANPDGLAE RPVIGINNQW PPPRIDVQVG  60
   61 DRLIVNLHNS LGDEDTSLHF HGLFMNGSNH MDGPVMVTQC PIPPGASFTY NFTVDQPGTY 120
  121 WYHSHNKGQY PDGFRGPLVI HDPKAPFEYD EELVLTVSDW YHDRMSLLQP RFMSKYNPTG 180
  181 AEPVPKSALM NDTQNLTMPM VPDRTYLFRI ANIGAFAGQY IWVEDHTITV VEMDGVYVHP 240
  241 TETNMVYVAA AQRCSFLLTA KKETSRNFPI IASMDTTLFD TIPPGLNTNV TSYLLYNPTA 300
  301 PLPLPTPLDS LTPLDDTLLF PQDNLTTLPS PDQTITLNVT MNNLASGANY AFFNDITYVP 360
  361 PRVPTLYTVL SSPNSSSSQD MDLTTNPSIY GTYTHPFILS HNSIVQIVLN NLDSGRHPFH 420
  421 LHGHQFQILH RSGADEGTWS PSSSSSSSTS SFSTSNGSNH TAPMRRDTLV VEPNGNAVIR 480
  481 FQADNPGVWL FHCHIEWHMI SGLAVTFIEA PSVLQQTINL PADHLAACRD RQDPIPFEGN 540
  541 AAGRGGKDKN DLSQWLVLDG QPSPPKPIPA GFTGGGIAAL TMSCFTGILG VAVVAWYGFS 600
  601 EPVGESNTAA AMVKTKSPAA AGESGSESGV YTDVDVDSAG KSASVVRVKR GTEAVESEAL 660
  661 SFGSEEEAVN GVGMATSKKG DGVVVDVDAI TRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle