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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85081746
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLNPTFIF GIFVLLYLSS FIIFAVVRIL TGLSIQRIGY FSLRRLAYTP KDGIKIEIRG  60
   61 LGLNVHRPTF AQPTWLSIVV DELAVTVDVK EVEKSKTKHV TGKPPGDTSD NTKPGEKGET 120
  121 EPLLPTPPQV PGIKADTSAE GRGKTWKQLT KLKEKIKRLH RSLDYLHMVD IVATSSTLTV 180
  181 TDVGSVQIGS FTLAVDTRDK MVDRARFFLQ SRSDQPGEQR QAEWIITIRS VLFTAHGRQA 240
  241 TEILDGASFN VHGFLYGTQD GLRDAAVGLK LGRLHIPYDD VQHSALLYKK IKELAEQVVG 300
  301 VQPKPLDEFV EKVMQEIDVP GSTNRELMQT VSESKELVSS VLRGVKEVQF AVSFIGLTKK 360
  361 VESVKAGGTP VVLNASMKEV GIDLHRLDPK SPAHRMYFPS KDIAHEALAA ALSISVGIDD 420
  421 GQGKPERLMY IPMATTTVRT TLPSKTVELA EEGTAEERNA NMLFANSVVT SPSVDLNPRH 480
  481 LPLLLAILRP KPKRKTENRQ PHMLISRLLP KANIKFSMHE PVLRITLPPV EKGVGPDEFD 540
  541 LLISSISSVS LDLESFHSAV EELHYSLAAS LRIQTHDLYY QTSSGERFDL LITEAFDLKV 600
  601 QLNATPDVHV VAQGNLQTFA LKLVRGEIGD GLHHIVRQLR PDVKPDKLTM PKSSPKKSNF 660
  661 LRGVPAWLLQ FQFQCSDFSL AVAGVDKEIA EDARGVAIEL ESWSIDYRAQ RIDGLQRRSS 720
  721 RRRASSRSLI PSEAELMKLA PTSPRKKHHH EGDGRRVAVH VRGLEAFMVE SDDIGIEPFL 780
  781 SMPKLELAFS TLSDNQGPVF QVQANMKKLL VQYSLYRHYA VALAVSVLLK AFGRPGKPTA 840
  841 AEPATPTEAS PQRRVVGLLS PLSADSGFDS LVMDDESTTA REFVSIDAKV TMIQVKADLP 900
  901 TDPPLMAHIY ALEAGCQRWS APFCQAKLIR LFAEAPRMRK VWARVLSIKN GRVDYRESRR 960
  961 KFSNGSVRDE RMVDIASDTI RVAVPHEMVG HKITDNVVNV IKSAKQLHHR FKTGTNEYIL1020
 1021 DKGPEGPKTV PKVSLRARTL LFDLEDGAFE WKLGMIYRAA RVEQKQRQAR EEAFRIKVKK1080
 1081 IHEEATRDSS KLRTRSAAPR GRASPGGGGH IRSHSTDSRQ QLGTDPHFRG RVPRYDPDGG1140
 1141 RLNITGNTEI SIGQARHNLH LHNARSWKRR IDRQYAAARD EVKDLHQDYW GSDETIAEDL1200
 1201 GEGENILEVP LRHALMSAVV DDLHFVVDKP SFPLRDLPDF LHKVGKGMPK DMEYTMLVPL1260
 1261 SVQISMGEAR VSLRDYPLPF IHVPATKSNQ SARLPALTLK TDFVIAEEFR GVESTRKIRV1320
 1321 QVIPPQSHDS SEPNKGSFAI DVSRTIGPVK MFSDMHIDVH TANPTRITWG PSYQPAVQDM1380
 1381 MMAIESLTKP QLDPSERVGF WDKIRLSFHS RFRVTWRGNG DVHLALKGSR DPYEVTGDGA1440
 1441 GFLMCWRNDV RFNINVDDDP KKFMTVDSGE CVLAVPDYSH HVREGRCRHG ENESIASESR1500
 1501 HKSTASFKKV VMKLSGKVQW LAGLVFEQAI ENGHRNFEFK PHYEVVLKSP QYAKPQNGLP1560
 1561 YDAFRGFRSQ HIHLSVAIRA PVDREWTASN PPPSRSYNAI HLTPRFFTHF FSWLSLFSGP1620
 1621 LSLPVRQGSL WPNREKNSKK FGRHLATIKY NIMLAPLFLS HIYKHKDVED YSENAVSATG1680
 1681 IKVRLDSFML DLHQRREEFN TRDRGRGTQT RISSMKLHAG QLDLVSADIR AVSASIRGTT1740
 1741 ADAFLKHSLS TFVTDQEEDG TDLSRFTIPD NDLTWIDMDD FVELDWILPT EPNPDTKILP1800
 1801 LAFAPRITYF RQTDIGGVID GDPDRSSPFG QEPTHSCIMS QDDDPRRIQV QLIRQRLKQL1860
 1861 DKQMETHSRN LGEIELRLVR DEDPDLKADF EALTRHTTVL VEKRVFLEGM LKEMTQTSHC1920
 1921 CAESEDSSSS SSAKAEARKS KADIRGSMST PTEAEFASDF KNRFVVHNLQ LKWNNTLRNI1980
 1981 ILRYIHQVGQ RRGFVYYMSR PAVKFILDIV EEQNKNKVAK ESNSTPSASS PNVNSTERDT2040
 2041 QGDIEDRIRK ILEDGKKFAS AEDAGPGSPS MADLASGIAK EYMAQSSYHI RVIAPQIQLQ2100
 2101 SDKNKKHVVL IAAKGMELKI VDVMDQSRLF DTVSGLVQRR FLVNMDSTQF FVTHQKWFST2160
 2161 QLVSMYSGNT YGTPAGSSWP PWVPMEVMFD FETDPFGFKR VVKKTSAMLR YDNYNTLRLK2220
 2221 YNDEVNASEA TDNDDGAAAD STESRMDNLW IEFPQAHALC NSSQYYAFYV IVVDLLMYSE2280
 2281 PLEKTRSERL EKIMLASDFS DLRGAPEMVI KLQERVRQLE DIKTHFQTHG KYMDKRGWKD2340
 2341 RLVLERDLAA CEDELFFMMK AITSSQRKYE SSTSSPLLRW SITAKEIVWH LIRDTSEPLV2400
 2401 ELQLKNVEYD RTDNSDGSHV NLIQVGSILG LNLLPDAIYP VMVAPYVDGH RGGFDPTSQP2460
 2461 MIRVYFHMLE AIAGIPVMDH FEVALFPLKI QLEREVGKKL FEYVFPGIDG DEATAAKNTS2520
 2521 PFIIKQTLPE DDEDAEDDGS LETVGIPDSD RELGGFSTRA GSLELRLRPT LTSDPEATPS2580
 2581 KNNKALSIHT GEGSSFRLFR SVGTGFKTVS KKPPSDESSL RPSTPRPSVG RTSTGLSSKD2640
 2641 GSSNPEAKKG TRFMLRKTAA DVEKRKKSDD LTKMIDRASN YMTFAYIKMP SVVLCLSYKG2700
 2701 KGDRNLEDVH NFVFRLPTIE YQNKTWSNLD LALNLKNRII KALISHTGAI IGNKFSKHRP2760
 2761 NTAQQSKLRE LATSSVLLAP ILSESRDNSG DDSSSIYNAS IVDFSRSPPR SIARSQTVSV2820
 2821 VPSSESRSSS IASSQRSPLV PQTTATAGTS SSAQSTASGP PAVGFTMTPP TPILPPGMDG2880
 2881 NQPHRGAFSL LRPATSAGSR LFGSSGGGTS GASPASNGDV ESISRPGTSS GVSMLRQSNT2940
 2941 VLRDDKESPE ATQRKAGYLR DKLSAISNRL KDRGGQSQSS PGPTSAPRDD ILNSDRALQE3000
 3001 VAEEEAERSE DLENRRPVTA HAAVGPGSIE AIGGPRPDIV GHRLSRSFSA SANT

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