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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40882158, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASLSSASA MASGSAGAEA GASSADASSS INASGTPAAS ASQAPSAASK AGSPQDGATP  60
   61 PVTQRDKDSL NRVLVDRFVT RDMIHAAALK DSQKALNQDM SNRLARVDQY KAMTSRDSRN 120
  121 RVPPAQLYGQ GYNGYGNGVT ETGGPVKIIY PSQKPRPGKR TTPPLKFSRK DLKKQAEQHE 180
  181 ELVPIRIDVD WDKVKLRDTF TFNLHERLIP VEVFASQLVE DMGLKPPMDK HVHEQVVTQM 240
  241 VEQLQDFYPF VHSEEDALDP ELPYSAYKND DMRILIKLNI TIREHTLVDQ FEWDINNPMN 300
  301 SPEEFAARMA DELSLSGEFT TAIAHCIREQ TQLFTRSLYS VGHPFDGRPI EDPDLTAAFL 360
  361 PTPIPCTLRP NQQQKDYAPY LYENTEAELE RTETMFSREQ RRQKRSVNRR GGPQLPDLKE 420
  421 RQRTIRTAIV SSVIPGGVLD IEDSRLFKKT TGPVATTGGP GRGRRIIRDG DLSDSEDSMD 480
  481 SAPDSPAMSV PQAGTARTRG MRGAATAAAQ RMANIGRSET PETIVHHHET RMSRRFGREA 540
  541 TREETEEPLQ QQHIVTLRVH PARLRRIIQG RDSRTKPPAP APSGSGTPGN QRASSIALPG 600
  601 SMGPPPTTPA AGSQHNLTIK VATPPTSGAG AAAGGDDAIV GAVPALPSPA NGEALPPSEI 660
  661 PSQFTPGQGS FVPQLSEWLN KRLEVHQKYP NDSYDCIMRH NAVVMAWDGG SGGDVVVKIV 720
  721 PEKQAQELPP NA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle