YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33596299
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHGGVTLAAA LFLFRCRMSD SAPSRPRRTP VRPLFDPMAQ PWETANQGLA RVDERLLTPP  60
   61 ELRSSLRPAD HWRLDPLCAA EPRAPGREGS LVAAAVLIPL VMRADGVRVM LTQRAAHLHD 120
  121 HAGQVSFPGG RIEVSDATPV AAALREAQEE TGLPVQQVEV LGSMPQYFTA TGFAITPVVS 180
  181 LVQPDFELAP DAFEVAEVFE VPLSFLMDPA NHRLYRAALP DGYVRQYYAM PWQRYFIWGA 240
  241 TAGMLRNLYQ TVREALPG

Type	Start	End	Confidence
Signal Peptide	1	21	0.92
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	258	0.99