YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33572995
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQCPAFPGRF LRSSRMQISR HFPRLARRAA LALCLAGAAQ VHAQEAAVQR KSDYPFAATV  60
   61 ARLQDALRAK GMTIFAVIDH QAAAKQAGLD MPPTQVVVYG NPKAGTPLML AAPDFALELP 120
  121 LKVLVRETAS GEVLVVYHPA GTREGMLGLP AGMAQQLAGA ERIVDAAVRR APAD

Type	Start	End	Confidence
Signal Peptide	1	43	0.99
N-region	1	34
H-region	35	40
C-region	41	43
Cleavage Site	43	44
Non-Cytoplasmic	44	174	0.99