YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33565997
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCEKTAGDES GRRISRRAGN GEAGRLRSLS RLFDHFATAV TRWTGSPIAF SGACAAILAW  60
   61 ASTGPLFGYS EVWQLVVNTG TTIVTFLMVF LIQQAQNKDS RALHVKLDEL LVAVNGADVA 120
  121 LAEAENLDDD RLLELADAYA ARARRLVEHS TQRQRRDRGA EPEVGAARTR LARRPPGARA 180
  181 RRHARLCWWQ KQYARQRQGG DT

Type	Start	End	Confidence
Cytoplasmic	1	39	0.96
Transmembrane Helix	40	62	0.88
Non-Cytoplasmic	63	71	0.79
Transmembrane Helix	72	92	0.92
Cytoplasmic	93	202	0.96